2022-

On Aug. 9 -10 th, we will hold an international workshop, “Multi-scale Molecular Dynamics Simulation and Machine Learning of Biomolecular Systems”. The details and registration are found here .

Dr. Takaharu Mori (Senior Research Scientist) moved Tokyo University of Scinece as an associate professor.

A research paper about β-reaction stage I in tryptophan synthase by Dr. Shingo Ito et al. has been published in J. Chem. Phys.

A research paper about molecular mechanism of regulating protein condensation by Dr. Cheng Tan at al. has been published in JACS Au. Press Release (J)

Three collaborative works have been published in PNAS, Cell Rep, and PLoS Comput Biol.

A collaborative research work by Dr. Kiyoshi Yagi et al. has been published in JACS.

A research paper about a new approach to constructing the protein conformation landscape using the uniform manifold approximation and projection (UMAP) method by Dr. Mao Oide et al. has been published in J.Chem.Phys.

A collaborative research work by Dr. Takaharu Mori et al. has been accepted by Structure.

A research paper about kinase-inhibitor binding simulations using two-dimensional replica-exchange molecular dynamics by Dr. Ai Shinobu et al. has been published in Front. Mol. Biosci..

A research paper about computational analysis on the allostery of tryptophan synthase by Dr. Shingo Ito et al. has been published in J. Phys. Chem. B.

A research paper about residue-level coarse-grained models in GENESIS for large-scale molecular dynamics simulations by Dr. Cheng Tan et al. has been published in PLoS Comput. Biol..

Dr. Yuji Sugita received “the Commendation for Science and Technology by the Minister of Education, Culture, Sports, Science and Technology (Awards for Science and Technology, Research Category)”.

A research paper about receptor binding domain motions of SARS-CoV-2 spike protein by Dr. Hisham Dokainish et al. has been published in eLife.

We received “FY2021 RIKEN EIHO Award (RIKEN Significant Achievement Award)”.

A review paper about protein crowding simulation has been published in Curr. Opin. Struc. Biol.

A collaborative research work by Dr. Kiyoshi Yagi et al. has been published in Front. Mol. Biosci..

A review paper by Dr. Kiyoshi Yagi, Dr. Takaharu Mori et al. has been published in Curr. Opin. Struc. Biol.